Command of active matter by topological defects and patterns

Abstract: Self-propelled bacteria are marvels of nature with a potential to power dynamic materials and microsystems of the future. The challenge is in commanding their chaotic behavior. By dispersing swimming Bacillus subtilis in a liquid-crystalline environment with spatially-varying orientation of the anisotropy axis, we demonstrate control over the distribution of bacteria, geometry and polarity of their trajectories. Bacteria recognize subtle differences in liquid crystal deformations, engaging in bipolar swimming in regions of pure splay and bend but switching to unipolar swimming in mixed splay-bend regions. They differentiate topological defects, heading towards defects of positive topological charge and avoiding negative charges. Sensitivity of bacteria to pre-imposed orientational patterns represents a new facet of the interplay between hydrodynamics and topology of active matter.