Computing isogeny classes of typical principally polarized abelian surfaces over the rationals

Abstract: We describe an efficient algorithm which, given a principally polarized (p.p.) abelian surface $A$ over $\mathbb{Q}$ with geometric endomorphism ring equal to $\mathbb{Z}$, computes all the other p.p. abelian surfaces over $\mathbb{Q}$ that are isogenous to $A$. This algorithm relies on explicit open image techniques for Galois representations, and we employ a combination of analytic and algebraic methods to efficiently prove or disprove the existence of isogenies. We illustrate the practicality of our algorithm by applying it to 1 440 894 isogeny classes of Jacobians of genus 2 curves.