Algorithmic Identification of Essential Exogenous Nodes for Causal Sufficiency in Brain Networks
Abstract: In the investigation of any causal mechanisms, such as the brain's causal networks, the assumption of causal sufficiency plays a critical role. Notably, neglecting this assumption can result in significant errors, a fact that is often disregarded in the causal analysis of brain networks. In this study, we propose an algorithmic identification approach for determining essential exogenous nodes that satisfy the critical need for causal sufficiency to adhere to it in such inquiries. Our approach consists of three main steps: First, by capturing the essence of the Peter-Clark (PC) algorithm, we conduct independence tests for pairs of regions within a network, as well as for the same pairs conditioned on nodes from other networks. Next, we distinguish candidate confounders by analyzing the differences between the conditional and unconditional results, using the Kolmogorov-Smirnov test. Subsequently, we utilize Non-Factorized identifiable Variational Autoencoders (NF-iVAE) along with the Correlation Coefficient index (CCI) metric to identify the confounding variables within these candidate nodes. Applying our method to the Human Connectome Projects (HCP) movie-watching task data, we demonstrate that while interactions exist between dorsal and ventral regions, only dorsal regions serve as confounders for the visual networks, and vice versa. These findings align consistently with those resulting from the neuroscientific perspective. Finally, we show the reliability of our results by testing 30 independent runs for NF-iVAE initialization.
- Beckers S. Causal sufficiency and actual causation. Journal of Philosophical Logic. 2021 Dec;50(6):1341-74.
- Harris KD, Thiele A. Cortical state and attention. Nature reviews neuroscience. 2011 Sep;12(9):509-23.
- Ungerleider SK. Mechanisms of visual attention in the human cortex. Annual review of neuroscience. 2000 Mar;23(1):315-41.
- Luo TZ, Maunsell JH. Neuronal modulations in visual cortex are associated with only one of multiple components of attention. Neuron. 2015 Jun 3;86(5):1182-8.
- Oberauer K. Working memory and attention–A conceptual analysis and review. Journal of cognition. 2019;2(1).
- Panichello MF, Buschman TJ. Shared mechanisms underlie the control of working memory and attention. Nature. 2021 Apr 22;592(7855):601-5.
- Forré P, Mooij JM. Constraint-based causal discovery for non-linear structural causal models with cycles and latent confounders. arXiv preprint arXiv:1807.03024. 2018 Jul 9.
- Gerhardus A, Runge J. High-recall causal discovery for autocorrelated time series with latent confounders. Advances in Neural Information Processing Systems. 2020;33:12615-25.
- Wang YS, Drton M. Causal discovery with unobserved confounding and non-Gaussian data. Journal of Machine Learning Research. 2023;24(271):1-61.
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