Scan-Adaptive MRI Undersampling Using Neighbor-based Optimization (SUNO)

Abstract: Accelerated MRI involves collecting partial k-space measurements to reduce acquisition time, patient discomfort, and motion artifacts, and typically uses regular undersampling patterns or hand-designed schemes. Recent works have studied population-adaptive sampling patterns that are learned from a group of patients (or scans) based on population-specific metrics. However, such a general sampling pattern can be sub-optimal for any specific scan since it may lack scan or slice adaptive details. To overcome this issue, we propose a framework for jointly learning scan-adaptive Cartesian undersampling patterns and a corresponding reconstruction model from a training set. We use an alternating algorithm for learning the sampling patterns and reconstruction model where we use an iterative coordinate descent (ICD) based offline optimization of scan-adaptive k-space sampling patterns for each example in the training set. A nearest neighbor search is then used to select the scan-adaptive sampling pattern at test time from initially acquired low-frequency k-space information. We applied the proposed framework (dubbed SUNO) to the fastMRI multi-coil knee and brain datasets, demonstrating improved performance over currently used undersampling patterns at both 4x and 8x acceleration factors in terms of both visual quality and quantitative metrics. The code for the proposed framework is available at https://github.com/sidgautam95/adaptive-sampling-mri-suno.