Determining 3D atomic coordinates of light-element quantum materials using ptychographic electron tomography

Abstract: Understanding quantum materials at the atomic scale requires precise 3D characterization of atomic positions and crystal defects. However, resolving the 3D structure of light-element materials (Z <= 8) remains a major challenge due to their low contrast and beam damage in electron microscopy. Here, we demonstrate ptychographic atomic electron tomography (pAET), achieving sub-angstrom 3D atomic precision (11 pm) in light elements, marking the first-ever experimental realization of 3D atomic imaging for light-element materials. Using twisted bilayer graphene as a model system, we determine the 3D atomic coordinates of individual carbon atoms, revealing chiral lattice distortions driven by van der Waals interactions that exhibit meron-like and skyrmion-like structures. These findings provide direct insights into the interplay between 3D chiral lattice deformation and electronic properties in moire materials. Beyond TBG, pAET offers a transformative approach for 3D atomic-scale imaging across quantum materials, 2D heterostructures, functional oxides, and energy materials.