From Moments to Models: Graphon Mixture-Aware Mixup and Contrastive Learning

Abstract: Real-world graph datasets often consist of mixtures of populations, where graphs are generated from multiple distinct underlying distributions. However, modern representation learning approaches, such as graph contrastive learning (GCL) and augmentation methods like Mixup, typically overlook this mixture structure. In this work, we propose a unified framework that explicitly models data as a mixture of underlying probabilistic graph generative models represented by graphons. To characterize these graphons, we leverage graph moments (motif densities) to cluster graphs arising from the same model. This enables us to disentangle the mixture components and identify their distinct generative mechanisms. This model-aware partitioning benefits two key graph learning tasks: 1) It enables a graphon-mixture-aware mixup (GMAM), a data augmentation technique that interpolates in a semantically valid space guided by the estimated graphons, instead of assuming a single graphon per class. 2) For GCL, it enables model-adaptive and principled augmentations. Additionally, by introducing a new model-aware objective, our proposed approach (termed MGCL) improves negative sampling by restricting negatives to graphs from other models. We establish a key theoretical guarantee: a novel, tighter bound showing that graphs sampled from graphons with small cut distance will have similar motif densities with high probability. Extensive experiments on benchmark datasets demonstrate strong empirical performance. In unsupervised learning, MGCL achieves state-of-the-art results, obtaining the top average rank across eight datasets. In supervised learning, GMAM consistently outperforms existing strategies, achieving new state-of-the-art accuracy in 6 out of 7 datasets.