The Role of Congeniality in Multiple Imputation for Doubly Robust Causal Estimation

Abstract: This paper provides clear and practical guidance on the specification of imputation models when multiple imputation is used in conjunction with doubly robust estimation methods for causal inference. Through theoretical arguments and targeted simulations, we show that when a confounder has missing data the corresponding imputation model must include all variables used in either the propensity score model or the outcome model, and that these variables must appear in the same functional form as in the final analysis. Violating these conditions can lead to biased treatment effect estimates, even when both components of the doubly robust estimator are correctly specified. We present a mathematical framework for doubly robust estimation combined with multiple imputation, establish the theoretical requirements for proper imputation in this setting, and demonstrate the consequences of misspecification through simulation. Based on these findings, we offer concrete recommendations to ensure valid inference when using multiple imputation with doubly robust methods in applied causal analyses.